All mice were maintained in a pure C57BL/6 background and housed in a room with a 12 hr light/dark cycle (light
on at 7 am) with access to food and water ad libitum. Tail DNA was collected to identify the genotypes Epigenetics Compound Library in vitro of animals using PCR. All procedures relating to animal care and treatment conformed to the institutional and NIH guidelines. Male mice (KO and CT) between 12–16 weeks of age were anesthetized i.p. with avertin (300 mg/kg, 1.25% solution) and implanted with a microdrive hosting six independently adjustable tetrodes. The tetrode tips were gold-plated before surgery in order to reduce impedances to 200–250 kOhms. The tetrodes were positioned above the right hippocampus (AP −1.8 mm, ML 1.6 mm) to aim for dorsal CA1. The microdrive was secured to the skull using watch screws and dental cement and a screw fixed to the skull served as a ground electrode.
The tetrodes were lowered over 10–14 days in steps of 40 μm until ripple and the hippocampal units could be identified. One designated electrode was targeted to the white matter above hippocampus to record a reference signal. Recorded unit signals were amplified 8 k to 20 k times and high-pass filtered above 6 kHz, whereas EEG signals from the same tetrodes were amplified 5 k times and band-pass filtered between 1 and 475 Hz. The animal’s position was tracked with a 30 frames/s camera using a pair of infrared diodes attached to the animal’s head. Hippocampal activity was recorded using a 16-channel Neuralynx recording system, (Neuralynx, Bozeman, MT) while mice were in either a square enclosure (17 × 17 × 17 cm; “sleep box”) or a linear track (76 × 10 cm). Ipilimumab manufacturer The recording session consisted of one “RUN” epoch on the track (40–60 min) bracketed by two “SLEEP” epochs (30–60 min) in which the animal rested quietly in the sleep box in the same room. Following the recording session, manual clustering of spikes was done with XCLUST2 software (developed by M.A. Wilson, MIT). At the end of the experiment, mice were
else given a lethal dose of avertin and an electric current (50 mA) was delivered to create a small lesion at the tip of each tetrode. Animals were then transcardially perfused with 4% paraformaldehyde in 1 × phosphate-buffered saline and brains were removed, sliced in 50 um with a Vibratome, and mounted on slides to verify the recording positions. All experiments were conducted and analyzed by researchers blind to the genotype of the individual animals. One electrode from each tetrode that had at least one cluster was considered for EEG analysis. EEG signal of each electrode was denoised for 60 Hz electric noise and its 180 Hz harmonic using a second-order IIR notch filter. Denoised EEG was filtered at ripple frequency range (100–240 Hz) with a fifth-order Butterworth band-pass filter. The envelopes of each band-passed EEG were obtained using the absolute value of its Hilbert transform and these envelopes were averaged over all electrodes.