Clustered synaptic inputs likely enable extended dendritic branch

Clustered synaptic inputs likely enable extended dendritic branches and filopodia to test for correlated input activity from several potential presynaptic partners ( Stepanyants et al., 2002). Similarly, MSBs enable presynaptic axons to sample several postsynaptic partners. Together activity-dependent synapse elimination and maturation contribute to the experience-dependent refinement of the retinotectal projection. In conclusion, this study combined in vivo time-lapse two-photon imaging with serial section EM-based 3D reconstruction of two intrinsic optic tectal neurons to identify the mechanisms of synaptic refinement during circuit development. By interpreting ultrastructural features of synaptic connectivity in light

of structural dynamics of axons and dendrites, we demonstrate a prominent role of synapse elimination in experience-dependent click here circuit refinement. In light of the considerable attention now being focused on the possibility of determining connectivity maps of Ku-0059436 concentration CNS circuits (Bohland

et al., 2009, Chou et al., 2010, Lichtman et al., 2008 and Lu et al., 2009), this study demonstrates the degree of microcircuit dynamics that can occur in the developing CNS. All experimental protocols were approved by the Cold Spring Harbor Laboratory Animal Care and Use Committee and complied with the guidelines established in the Public Health Service Guide for the Care and Use of Laboratory Animals. Single optic tectal neurons in stage 44 Xenopus laevis tadpoles were transfected by single-cell electroporation ( Bestman aminophylline et al., 2006) with a construct with two CMV promoters that expresses both EGFP and mHRP, called pCMV::EGFP/mHRP, as described in detail ( Li et al., 2010). We collected two-photon images once a day over 3 days (day 1, 2, and 3) or every 4 hr over 8 hr

(0 hr, 4 hr, 8 hr) and arbor structure was analyzed as described previously ( Ruthazer et al., 2004) and in more detail in Supplemental Experimental Procedures. Tissue was processed for electron microscopy as described in detail in Supplemental Experimental Procedures and in (Li et al., 2010). We used RECONSTRUCT software (freely available from www.synapses.clm.utexas.edu) (Fiala, 2005) for 3D reconstruction (Li and Cline, 2010). Detailed descriptions of the methods used to quantify synaptic maturation and divergence of contacts from individual presynaptic boutons during CNS development have been published (Haas et al., 2006 and Li and Cline, 2010) and are described in Supplemental Experimental Procedures. The Mann-Whitney test was used for statistical comparisons between two data sets. The Kruskal-Wallis test with post hoc analysis was used for comparison among three groups. Data are presented as mean ± standard error of the mean (SEM), and all error bars are SEM. The alpha of the confidence level was set at 0.05. This work was supported by the NIH (RO1 EY-011261, EY-011261-14S1, DP10D000458 [H.C.] and RO1-EY12138 [A.E.

For linear and branched PEI polyplexes, particle sizes from 167 t

For linear and branched PEI polyplexes, particle sizes from 167 to 114 nm were measured and zeta potential values ranged from 32 to 48 mV. Polyplexes made with the PAMAM dendrimer G5 showed particle sizes from 215 to 101 nm and zeta potential values from 32 to 42 mV. Polydispersity indices (PDI) were low and about 0.1–0.3, indicating that discrete

particle sizes were present. When using the PAMAM dendrimers of generation 2, complexes could not be successfully generated. Particle sizes fluctuated around 1 μm with a PDI of about 1 and a zeta potential that was zero Veliparib mw or even negative due to an excess of negative charges from incompletely bound pDNA. This means that complexation was not efficient and therefore these complexes were not selected for cytotoxicity and any further studies, as we expect a low transfection capacity. BGM cells were used to

test gene expression efficiencies of lipoplexes and polyplexes. Before testing the expression level of different plasmid DNA complexes, their toxicity was determined. BGM cell viability, 48 h after exposure of the cells to increasing amounts of polyplexes and lipoplexes, is shown in Suppl. Fig. 2. Cell viability measured 24 h after exposure to plasmid DNA complexes was higher but revealed the same trends. Lipoplexes and polyplexes that decreased cell viability below 60% were excluded from further expression experiments. When comparing the cytotoxicity

Proteases inhibitor of the complexes, it was clear that all complexes were more cytotoxic than pDNA (except for PAMAM much dendrimer G5 complexes of ratio 1). The commercially available PolyFect® transfection reagent was most toxic to the cells, with the exception of lPEI complexes at ratio 20. Cytotoxicity increased with increasing ratio and increasing amount of polyplexes or lipoplexes. Cytotoxicity tests were repeated under the same conditions as in the expression experiments (transfection in the absence of serum and antibiotics and removal of the complexes after 3 h of incubation with the cells). Twenty-four and forty-eight hours following transfection, we found all complexes to be less cytotoxic under these conditions (data not shown). This is probably due to the shorter contact period with the cells. Therefore, only the data shown in Suppl. Fig. 2 were considered when selecting complexes suitable for expression experiments. The transfection efficiencies of the various lipoplex and polyplex formulations, expressed as the percentage of EGFP positive BGM cells, are given in Fig. 1. Data represent the percentage of transfected BGM cells 24 h post-transfection. A similar trend was observed when analyzing the cells 48 h post-transfection. However, the percentage of positive cells declined with about 50% (data not shown). Naked plasmid DNA did not transfect the BGM cells efficiently as only 0.5% of the cells expressed EGFP.

The oral bioavailability of DNDI-VL-2098 was good to excellent in

The oral bioavailability of DNDI-VL-2098 was good to excellent in all four

species ( Table 2). DNDI-VL-2098 showed close to dose proportional exposures in rodents (Table 2). Oral exposure in hamster and mouse were determined across the 6.25–50 mg/kg range (doses tested for efficacy) using formulations identical to those used in efficacy studies. In both species, bioavailability was 100% at the lowest 6.25 mg/kg dose, and in both species an 8-fold increase in dose (from 6.25 to 50 mg/kg) led to an 11-fold increase in exposure. In high throughput screening assay rat, oral exposures were determined across the 5–500 mg/kg dose range (doses tested in early safety studies) using a suspension in CMC. Here, a 100-fold increase in dose led to about a 100-fold increase in exposure. Fig. 3a summarizes the relationship between dose and dose-normalized AUCs (DNAUC) in various species following suspension administration. The dose-normalized AUCs of DNDI-VL-2098 were generally independent

(within 2-fold) JQ1 price of the administered doses. In the rat and dog, oral solution and suspension exposures were determined at 5 mg/kg. In both species, the mean solution exposure was higher than that with suspension (Fig. 3b). In the dog at the higher dose of 50 mg/kg given as suspension, exposure did not increase proportionally (Table 2). A similar “apparent solubility limited absorption” did not occur in the rat where exposures increased dose-proportionally up to 500 mg/kg given as suspension. This observation is consistent with DNDI-VL-2098 being a low solubility/high permeability compound, with the high permeability overriding any limitation that low solubility may pose to absorption, at least in the rat. Because exposures increased proportionally with dose in the rat at high doses, follow up studies were performed in the dog at higher doses using a corn oil formulation.

As solubility of DNDI-VL-2098 was less in water, an oil-based formulation using corn oil was evaluated. In this case, a 100-fold increase in dose from 5 mg/kg to 500 mg/kg, led to a 37-fold increase in exposure (AUClast). By using a 500 mg/kg BID dosing (dosed 8 h apart; total dose 1000 mg/kg), there was heptaminol a 50% increase in exposure (360 ± 36 μg h/mL; n = 3) compared to that obtained at the 1250 mg/kg QD dose (246 ± 74 μg h/mL; n = 3, Fig. 4). The preclinical PK parameters were used to perform allometric scaling to predict pharmacokinetics in humans. First, simple allometric scaling of the clearance and volume of distribution data was performed using Y = aWb, where Y is the parameter of interest, and a and b are coefficient and exponent of the allometric equation, respectively, and W is body weight. The clearance exponent calculated with this approach was 0.9. Because it exceeded 0.7, the maximum lifespan potential (MLP (years) = (185.4) (Br0.636) (BW−0.225)) approach was used ( Mahmood, 2007). The MLP method gave estimates of 1.

A 12-year-old child with a left small scrotal mass was referred t

A 12-year-old child with a left small scrotal mass was referred to our institution. On physical examination, the mass was located in the cefaled end of epididymis. Ultrasound examination revealed

normal testes on both sides and ipoechogenic mass 1 × 1 cm attached to left epididymis (Fig. 1). At operation, an encapsulated dark purple red mass was found attached to the head of the left epididymis. Frozen section showed normal splenic tissue. Accessory splenic tissue was not found in spermatic cord (Fig. 2). Postoperatively, ultrasound examination revealed that the orthotopic spleen was normal. We also performed abdominal and scrotal echographic examinations in parents and siblings. In a brother 14-year-old, an accessory little spleen (1.1 cm diameter) was found near to the splenic hilum (Fig. 3). SGF, first described in 1883 by Boestrem, represents 10% of scrotal masses. Different SNS-032 incidence in both sexes may be subsequent to a missed diagnosis because of ovary location and lack of symptoms. In the 4 cases reported in female patients, splenic tissue was adjacent to the ovary or mesovarium. Diagnosis may occur at any age (1-81 years): most reported patients (82%)

are younger than 30 years, but 50% of SGF have been described in children.1 In 1889, Pommer described a case associated with limb defects, micrognathia, anal atresia, and other congenital abnormalities. Antenatal ultrasound diagnosis Fulvestrant manufacturer is reported in 2 cases.2 Unusual cases of right SGF were also described.3 A teratogenic insult occurring between 5 and 8 weeks of fetal life, when the spleen, gonads, limb buds, and mandible are developing has been postulated. Adhesion or lack of apoptosis at the interface between the splenic primordium and contiguous genital ridge may occur. Precursor structures of shoulder bones are very close: this is probably related to limbs malformations. The right-sided cases may be because of situs inversus. Colonization by splenic cells of an abnormal suspensory ligament of testis has been also suggested. The few cases of intragonadal spleen may be a consequence of induction of

hemopoietic potencies in gonadal mesenchyma. De Ravel 97 reported tetra-amelia and SGF in Roberts science syndrome and Alessandri in 2010 described a genetic mutation (RAB 23) in a family with Carpenter syndrome and SGF.4 Accessory spleen in a sibling, not previously reported to our knowledge, suggests familial predisposition of this disorder. Up to now, approximately 160 cases have been reported, mainly in the form of single case the majority was based on autopsy findings.1 Continuous type is associated with major congenital abnormalities (oro—facial and limb developmental abnormalities: SGFLD syndrome), cryptorchidism, spina bifida, cardiac defects, diaphragmatic hernia, hypoplastic lung, and anorectal abnormalities. Association with cryptorchidism is the most common (31%) particularly on the left side (65%).

Typical growth curves of runs 1–7 are shown in Fig 1a and the co

Typical growth curves of runs 1–7 are shown in Fig. 1a and the corresponding produced OMV in Fig. 1b. The behavior of pH variation and glycerol concentrations during cultivation

are presented in Fig. 1f and e, respectively. The lactate and l-glutamic acid consumptions are shown in Fig. 1c and d, respectively. From these behaviors, it is evident that substrate consumption exerted remarkable influence on growth kinetics and OMV production. The analysis of the related dry mass and optical density indicated an average value of 0.46 g/L for each unit of O.D. (SD 0.06). This coefficient was employed for estimating dry biomass values from the O.D. values and for calculating μP. According to the kinetics parameters presented in Table 1, the assays of Series A and B (original Catlin medium and original Catlin medium with lactate and amino acids pulse at the 6th cultivation hour, respectively) presented http://www.selleckchem.com/products/Adriamycin.html Anti-diabetic Compound Library research buy similar values of OMV maximum concentration (Pmax) and OMV productivity (ProdP) for these two groups. However they were the lowest ones considering the overall experimental results. Series A and B presented, respectively, average values of Pmax = 56.2 mg/L and ProdP = 3.03 mg/(L h). On the other hand, Series C experiments (Catlin medium, double initial concentrations of lactate and amino acids) presented the highest

values of these parameters, namely Pmax = 162 g/L and ProdP = 8.1 mg/(L h). In all assays, glycerol was not consumed ( Fig. 1e). In Series D (Catlin medium, without glycerol,

double initial concentrations of lactate and amino acids), the values of Pmax = 121 g/L and ProdP = 6.0 mg/(L h) were slightly better than other those from Series C. The highest OMV concentrations were obtained in Series C (where initial glycerol concentration was maintained old and the initial concentrations of amino acids and lactate doubled) ( Fig. 1c and d, run 6). Glycerol was not consumed in cultivations [25], so it has no direct influence on the OMV production. A plausible hypothesis is that glycerol could be the mechanical protector of the OMV released to the cultivation medium. Lactate is the main limiting carbon source while l-glutamic acid is the main limiting nitrogen source ( Fig. 1 and Fig. 2). l-Glutamic acid consumption contributes to ammonia formation and pH rising in the course of the cultivation ( Fig. 1f). By employing the original Catlin medium (Series A) lactate concentration decreased to zero at the 8th cultivation hour. At this moment, the cultivation reached the stationary growth phase ( Fig. 1a). Thus, its consumption is directly related to cell growth. From Series A experiments amino acids were analyzed in order to estimate the specific amino acid yield factor to conduct further assays ( Fig. 2).

To date, treatment options for metastatic uveal melanoma are limi

To date, treatment options for metastatic uveal melanoma are limited, and compelling evidence that any systemic therapy, including chemotherapy, improves overall survival is lacking.6 Disease stabilization is described in several patients receiving ipilimumab, which recently has shown survival benefit in metastatic cutaneous melanoma patients.22 However, data are based on a limited number of patients.23 and 24 Therefore, effective therapies resulting in meaningful clinical benefit are required urgently, and immunotherapy may be a promising treatment method. Immune-based GDC-0068 supplier therapies

aim to induce antitumor immunity. Despite uveal melanoma developing in the immune-privileged environment of the eye, immune cells have been found within uveal melanoma, including dendritic cells and T cells.25, 26 and 27 Dendritic cells are antigen-presenting cells with the Paclitaxel unique capacity to activate naïve antigen-specific T cells, and hence are suitable for inducing immunologic

antitumor responses (Figure 1). Dendritic cell-based immunotherapy has shown promising results in cutaneous melanoma patients.28 Although uveal and cutaneous melanoma are different biologically, cutaneous melanoma and uveal melanoma share many antigenic features, including tumor antigens, providing a rationale for the application of dendritic cell-based therapies in uveal melanoma. The tumor antigens used in our dendritic cell vaccination studies for metastatic melanoma patients, gp100 and tyrosinase, are both expressed in most human uveal melanoma tumor cells,29 and 30 and thus constitute an appropriate target for immunotherapy in uveal melanoma. Our research group has performed several prospective dendritic cell vaccination studies in patients with melanoma, of which most consisted of patients with cutaneous melanoma. We here present data on the subset of metastatic uveal melanoma patients who were enrolled in these studies. The studies were approved by the Dutch Centrale Commissie Mensgebonden Onderzoek

(Central Committee on Research Involving Human Subjects), and written informed consent to participate in research was obtained from all patients. The trials were registered at ClinicalTrials.gov (identifiers much NCT00940004, NCT01690377, NCT01530698, and NCT00243529). We analyzed a cohort of 14 patients with metastatic uveal melanoma who were enrolled in our prospective dendritic cell vaccination studies between October 2002 and May 2011. Patients were required to have at least 1 measurable target lesion. Additional inclusion criteria were melanoma expressing the melanoma-associated antigens gp100 (compulsory) and tyrosinase (noncompulsory), HLA-A*02:01 phenotype (protocols I, III, IV, V, and VI), known HLA-DRB*01:04 status (protocol IV), and World Health Organization performance status 0 or 1. Patients with serious concomitant disease or a history of second malignancy were excluded.

Moreover, the rat mesenteric

artery reportedly does not e

Moreover, the rat mesenteric

artery reportedly does not express functional NMDArs (51). (±)Ketamine racemate has been reported to inhibited NR1/NR2A and NR1/NR2B channels with IC50 values of 13.6 ± 8.5 and 17.6 ± 7.2 μM, respectively, whereas S(+)-ketamine inhibited NR1/NR2A and NR1/NR2B with IC50 values of 4.1 ± 2.5 and 3.0 ± 0.3 μM, respectively (52). The IC50 values of (+)MK801 and (−)MK801 for inhibiting channels with the NR1 subunit and various NR2 subunit complexes (NR1/NR2X) ranged PD0325901 concentration from 9–38 nM and from 32–354 nM, respectively. These IC50 values for inhibiting NMDArs are distinct from those for inhibiting Kv of RMASMCs. The pKa of MK801 is 8.37, and thus approximately 94% of MK801 exists in its protonated, positively charged form at pH 7.2 (the pH of the pipette solution). The results of this study showed that MK801 inhibition of Kv-channel currents was completely voltage-independent (Fig. 3), which suggests that the MK801-binding site of Kv channels is not affected by the sensing of the transmembrane potential, unlike in the case Lumacaftor ic50 of the binding sites for open-pore blocking agents. In this study, we did not examine whether an extra-

or intra-cellular site is responsible for the MK801-Kv channel interaction, which warrants future investigation. As described above, MK801 is a potent NMDAr inhibitor. NMDAr is a glutamate receptor and glutamate is the brain’s primary excitatory neurotransmitter. NMDAr is an ionotropic receptor that, when activated, causes the influx of Ca2+ and other cations. MK801 blocks the NMDAr in a state- and voltage-dependent manner, because the PCP-binding sites in the NMDAr are accessible to MK801 only when the channel is open or activated. Therefore, the mechanism by which MK801 was determined

to inhibit the Kv channels of RMASMCs in this study differs considerably from the mechanism of MK801 inhibition of the NMDAr channel. Because we examined the effect of MK801 on native Kv-channel currents in RMASMCs in this study, the specific target of MK801 remains unknown. Multimeric heteromers of several Kv-channel subunits such as Kv1.1, Kv1.2, Kv1.5, and Kv2.1 have been reported to contribute to the native Kv-channel currents of vascular smooth Electron transport chain muscle (53), (54) and (55). Furthermore, certain auxiliary Kv-channel beta subunits have been reported to contribute to the complexity and heterogeneity of native Kv currents (56) and (57). These Kv-channel subunits play critical roles in variety of excitable and non-excitable cells such as those in the cardiovascular system and in the CNS. Therefore, future studies could examine the effect of MK801 on specific Kv-channel subunits expressed in heterologous cell systems. As we stated above, we have observed that MK801 blocked the Kv1.5 expressed in CHO cells. The blockade of Kv1.5 by MK801 was very similar with that the present study.

Data on disease associated morbidity, mortality, disability, soci

Data on disease associated morbidity, mortality, disability, socio-economic distribution, and public health burden were analyzed to facilitate prioritization of diseases and potential vaccines [4], [5], [6] and [7]. This evidenced-based exercise enabled the EACIP to recommend priority diseases and priority vaccines

to be added to the immunization schedule. The EACIP submitted these recommendations to the MOH for consideration and further development of China’s current immunization policy and immunization schedule (Table 2). The EACIP presides over or participates in the drafting and review Anti-diabetic Compound Library of technical guidelines and proposals related to immunization policy, regulation, and disease control programs. Over the years, a number of regulations and technical guidelines have been disseminated by the MOH or the CCDC as formal documents. The public, physicians, PD0325901 nmr and public health doctors can obtain this information from the MOH (http://www.moh.gov.cn) and CCDC (http://www.chinacdc.net.cn) websites. The following sections list the documents developed and reviewed during recent years: Regulations on Management of Vaccine Circulation and Inoculation (2005);

Guideline of Immunization Technique (MOH, 2005). The National Plan of Action for the Elimination of Measles, During the Years 2006–2012; Implementation Proposal on Expansion of the Expanded Program for Immunization (MOH, 2007); The EACIP organized and participated in the national immunization coverage reviews in 1988, 1991, and 1994, the national EPI review in 2004, and the national hepatitis B sero-survey in 2006. EACIP experts play an important role in developing the proposals for such surveys. The EACIP members also have provided field supervision of supplemental immunization activities

(SIA), confirmed and certified China’s polio-free status, and recommended mass immunization programs, e.g., provision of hepatitis A and Japanese encephalitis vaccine in earthquake-stricken areas of Sichuan province in 2008 [8]. When requested by the MOH or CCDC, the EACIP participates in developing teaching materials and providing resource persons for different training activities organized by NIP/CCDC Cediranib (AZD2171) to strengthen staff knowledge and capacity. For example the EACIP developed the training materials for expansion of EPI in 2008, and held national training courses delivered to 1299 trainers at the provincial and prefecture levels. In addition, training courses were held at the provincial, prefecture, county and township levels attended by 434,449 EPI staff. The China EACIP will continue to guide efforts for Chinese EPI development, such as formulating mid-term or long-term development programs, and developing mid-term and long-term working criteria of the MOH’s Healthy China 2020 Plan.

Each intervention lasted 20 minutes Between the two intervention

Each intervention lasted 20 minutes. Between the two interventions, patients continued their usual treatments and airway clearance techniques. Participants were recruited from the Paediatric Cystic Fibrosis Centre between March and December 2006. Children attending the clinic were eligible to participate if they were aged 7–18 years; had a confirmed diagnosis of CF (two positive sweat tests and/or two cystic fibrosis transmembrane conductance regulator

gene mutations with compatible clinical signs), regardless of their basal pulmonary function 17-AAG chemical structure status; were clinically stable; and were able to expectorate and understand the protocol instructions. Patients were deemed stable when they had no signs of pulmonary exacerbation as defined by Rosenfeld and colleagues (2001), together with a predicted forced expiratory volume in 1 s (FEV1) that was not below 10% of the mean FEV1 calculated with the four previous values of the year. Patients with pulmonary exacerbation or deemed clinically unstable were adequately treated

and invited to participate later, whenever possible. Exclusion criteria were haemoptysis greater http://www.selleckchem.com/products/AZD2281(Olaparib).html than 50 mL in one day and permanent non-invasive ventilation. After eligibility was confirmed, one investigator (BK) at the Clinical Investigation Centre used a computer-generated randomisation list to allocate participants to commence the study protocol beginning with either the exercise with expiratory manoeuvres (experimental) intervention or the breathing

techniques (control) intervention. Participants started their first session of the study at the next scheduled quarterly clinic appointment to avoid making additional visits. Experimental intervention: The experimental intervention consisted of three periods of exercise each lasting 5 min, supervised by a physiotherapist (FA). The first period consisted of of 2 min of indoor jogging, 1 min of stair climbing (three floors), and 2 min of cycling on an ergometer. Resistance on the ergometer was adjusted to ensure that the participant’s respiratory rate was elevated during the 2 min of cycling. At the end of the first period, the patient performed several prolonged and brief expiratory flow accelerations with open glottis, the forced expiratory technique, and finally cough and sputum expectoration. These clearance manoeuvres were performed over 1.5 min. The second period consisted of 1 min of stretching repeated five times, followed by the same expiratory manoeuvres for 1.5 min, as described above. The third period consisted of continuous jumping on a small trampoline. It included 2 min of jumping, 2 min of jumping while throwing and catching a ball, and 1 min of jumping while hitting a tossed ball. This was again followed by expiratory manoeuvres for 1.5 min. The entire regimen was followed by 40 min rest.

These pharmacophores sites were used as queries for screening As

These pharmacophores sites were used as queries for screening. Asinex database was used for pharmacophore screening. The ligands were selected based on the fitness score. Fitness score is the sum of RMSD site matching, vector alignments, and volume terms. The ligands showing the best fitness scores were docked using IFD studies into the binding site of the protein. E-pharmacophore buy PD0325901 hypothesis was developed and a similarity search from Asinex database was performed toward the search for inhibitors for dengue virus NS5 MTase. Docking calculations were performed for three known inhibitors – RTP, SAH and SAM, to

analyze the important interactions between protein and the ligand, to generate a structural model for e-pharmacophore hypothesis. All docking calculations were performed using the ‘Extra Precision’ (XP) mode of GLIDE program and with OPLS-AA 2001 force field. All the compounds were docked in the active site of the receptor and the pose viewer files were generated. The Glide score and Glide energy of the e-pharmacophore hypothesis of the known inhibitors – RTP, SAH and SAM are shown in Table 1.

The e-pharmacophore combines aspects of structure-based and ligand-based techniques. Incorporating Fulvestrant protein–ligand contacts into ligand-based pharmacophore approaches has been shown to produce enhanced enrichments over using ligand information alone. The method attempts to take a step beyond simple contact scoring by incorporating structural and energetic information using the scoring function in Glide XP.26 The pharmacophore sites were predicted for RTP, SAH and SAM with seven features; of which, at least three were expected for all of these three ligands. The pharmacophore sites were listed based on the score; the top three highly scored sites were selected. The final pharmacophoric hypothesis for RTP consists of

two hydrogen bond donors (D) and a negative ionizable group (Fig. 2a), for SAH, a H-bond acceptor (A), a hydrogen bond donor (D) and a negative ionizable group (Fig. 2b) and for SAM, an H-bond acceptor (A), a hydrogen bond donor (D) and a negative ionizable group (Fig. 2c); their distances are shown in Fig. 2 a–c. These energetically favorable sites have the specific interactions for ligands Terminal deoxynucleotidyl transferase and this information should prove helpful in the development of new dengue MTase inhibitors. With this pharmacophore hypothesis, compound screening was performed against Asinex database. Receptor-based excluded volumes were included in order to reduce false positives by eliminating inactive compounds that cannot simultaneously match the hypothesis and avoid clashing with the receptor. Total of 38 compounds with fitness scores of more than 1.0 for RTP, 2.0 for SAH and 2.0 for SAM respectively were selected and were subjected to IFD in Glide. The best pose of compounds for each targeted binding site was short-listed by Glide score.